ANKRD13C

Protein-coding gene in the species Homo sapiens
ANKRD13C
Identifiers
AliasesANKRD13C, dJ677H15.3, ankyrin repeat domain 13C
External IDsOMIM: 615125; MGI: 2139746; HomoloGene: 41804; GeneCards: ANKRD13C; OMA:ANKRD13C - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for ANKRD13C
Genomic location for ANKRD13C
Band1p31.1Start70,258,999 bp[1]
End70,354,734 bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for ANKRD13C
Genomic location for ANKRD13C
Band3|3 H4Start157,947,239 bp[2]
End158,008,034 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • epithelium of colon

  • pancreatic epithelial cell

  • tibia

  • endothelial cell

  • corpus callosum

  • islet of Langerhans

  • palpebral conjunctiva

  • parietal pleura

  • amniotic fluid
Top expressed in
  • saccule

  • otic placode

  • human kidney

  • right kidney

  • proximal tubule

  • subiculum

  • olfactory tubercle

  • blood

  • epithelium of stomach

  • lacrimal gland
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • signaling receptor binding
Cellular component
  • perinuclear region of cytoplasm
  • endoplasmic reticulum membrane
  • membrane
  • endoplasmic reticulum
Biological process
  • protein retention in ER lumen
  • regulation of anoikis
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

81573

433667

Ensembl

ENSG00000118454

ENSMUSG00000039988

UniProt

Q8N6S4

Q3UX43

RefSeq (mRNA)

NM_030816

NM_001013806
NM_001359909

RefSeq (protein)

NP_110443

NP_001013828
NP_001346838

Location (UCSC)Chr 1: 70.26 – 70.35 MbChr 3: 157.95 – 158.01 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Ankyrin repeat domain-containing protein 13C is a protein that in humans is encoded by the ANKRD13C gene.[5][6]

Protein interactions

ANKRD13C is predicted to interact with Transmembrane Protein Domain 255A (TMEM255A).[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000118454 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000039988 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Wiemann S, Weil B, Wellenreuther R, Gassenhuber J, Glassl S, Ansorge W, Böcher M, Blöcker H, Bauersachs S, Blum H, Lauber J, Düsterhöft A, Beyer A, Köhrer K, Strack N, Mewes HW, Ottenwälder B, Obermaier B, Tampe J, Heubner D, Wambutt R, Korn B, Klein M, Poustka A (March 2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Research. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  6. ^ "Entrez Gene: ANKRD13C ankyrin repeat domain 13C".
  7. ^ Chatr-Aryamontri A, Oughtred R, Boucher L, Rust J, Chang C, Kolas NK, O'Donnell L, Oster S, Theesfeld C, Sellam A, Stark C, Breitkreutz BJ, Dolinski K, Tyers M (January 2017). "The BioGRID interaction database: 2017 update". Nucleic Acids Research. 45 (D1): D369–D379. doi:10.1093/nar/gkw1102. PMC 5210573. PMID 27980099.

Further reading

  • Hartley JL, Temple GF, Brasch MA (November 2000). "DNA cloning using in vitro site-specific recombination". Genome Research. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Simpson JC, Wellenreuther R, Poustka A, Pepperkok R, Wiemann S (September 2000). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Reports. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • Wiemann S, Arlt D, Huber W, Wellenreuther R, Schleeger S, Mehrle A, Bechtel S, Sauermann M, Korf U, Pepperkok R, Sültmann H, Poustka A (October 2004). "From ORFeome to biology: a functional genomics pipeline". Genome Research. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Mehrle A, Rosenfelder H, Schupp I, del Val C, Arlt D, Hahne F, Bechtel S, Simpson J, Hofmann O, Hide W, Glatting KH, Huber W, Pepperkok R, Poustka A, Wiemann S (January 2006). "The LIFEdb database in 2006". Nucleic Acids Research. 34 (Database issue): D415-8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.
  • v
  • t
  • e