CLDN12

Protein-coding gene in the species Homo sapiens
CLDN12
Identifiers
AliasesCLDN12, claudin 12
External IDsOMIM: 611232; MGI: 1929288; HomoloGene: 40809; GeneCards: CLDN12; OMA:CLDN12 - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for CLDN12
Genomic location for CLDN12
Band7q21.13Start90,383,721 bp[1]
End90,513,402 bp[1]
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)[2]
Chromosome 5 (mouse)
Genomic location for CLDN12
Genomic location for CLDN12
Band5|5 A1Start5,539,537 bp[2]
End5,564,958 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • secondary oocyte

  • islet of Langerhans

  • pancreatic epithelial cell

  • cartilage tissue

  • mucosa of sigmoid colon

  • right lobe of liver

  • rectum

  • pituitary gland

  • anterior pituitary

  • myocardium of left ventricle
Top expressed in
  • otolith organ

  • utricle

  • interventricular septum

  • retinal pigment epithelium

  • ascending aorta

  • supraoptic nucleus

  • ciliary body

  • primitive streak

  • aortic valve

  • epithelium of lens
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • structural molecule activity
  • identical protein binding
  • protein binding
Cellular component
  • integral component of membrane
  • cell junction
  • lateral plasma membrane
  • membrane
  • cell periphery
  • bicellular tight junction
  • plasma membrane
Biological process
  • calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

9069

64945

Ensembl

ENSG00000157224

ENSMUSG00000046798

UniProt

P56749

Q9ET43

RefSeq (mRNA)

NM_012129
NM_001185072
NM_001185073

NM_001193659
NM_001193660
NM_001193661
NM_022890

RefSeq (protein)

NP_001172001
NP_001172002
NP_036261

NP_001180588
NP_001180589
NP_001180590
NP_075028

Location (UCSC)Chr 7: 90.38 – 90.51 MbChr 5: 5.54 – 5.56 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Claudin-12 is a protein that in humans is encoded by the CLDN12 gene.[5] It belongs to the group of claudins.


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000157224 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000046798 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: CLDN12 claudin 12".

Further reading

  • Kniesel U, Wolburg H (2000). "Tight junctions of the blood–brain barrier". Cell. Mol. Neurobiol. 20 (1): 57–76. doi:10.1023/A:1006995910836. PMID 10690502. S2CID 26473781.
  • Heiskala M, Peterson PA, Yang Y (2001). "The roles of claudin superfamily proteins in paracellular transport". Traffic. 2 (2): 93–8. doi:10.1034/j.1600-0854.2001.020203.x. PMID 11247307. S2CID 12132159.
  • Tsukita S, Furuse M, Itoh M (2001). "Multifunctional strands in tight junctions". Nat. Rev. Mol. Cell Biol. 2 (4): 285–93. doi:10.1038/35067088. PMID 11283726. S2CID 36524601.
  • Tsukita S, Furuse M (2003). "Claudin-based barrier in simple and stratified cellular sheets". Curr. Opin. Cell Biol. 14 (5): 531–6. doi:10.1016/S0955-0674(02)00362-9. PMID 12231346.
  • González-Mariscal L, Betanzos A, Nava P, Jaramillo BE (2003). "Tight junction proteins". Prog. Biophys. Mol. Biol. 81 (1): 1–44. doi:10.1016/S0079-6107(02)00037-8. PMID 12475568.
  • Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Niimi T, Nagashima K, Ward JM, et al. (2001). "claudin-18, a novel downstream target gene for the T/EBP/NKX2.1 homeodomain transcription factor, encodes lung- and stomach-specific isoforms through alternative splicing". Mol. Cell. Biol. 21 (21): 7380–90. doi:10.1128/MCB.21.21.7380-7390.2001. PMC 99911. PMID 11585919.
  • Kiuchi-Saishin Y, Gotoh S, Furuse M, et al. (2002). "Differential expression patterns of claudins, tight junction membrane proteins, in mouse nephron segments". J. Am. Soc. Nephrol. 13 (4): 875–86. doi:10.1681/ASN.V134875. PMID 11912246.
  • Brandner JM, Kief S, Grund C, et al. (2003). "Organization and formation of the tight junction system in human epidermis and cultured keratinocytes". Eur. J. Cell Biol. 81 (5): 253–63. doi:10.1078/0171-9335-00244. PMID 12067061.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Scherer SW, Cheung J, MacDonald JR, et al. (2003). "Human chromosome 7: DNA sequence and biology". Science. 300 (5620): 767–72. Bibcode:2003Sci...300..767S. doi:10.1126/science.1083423. PMC 2882961. PMID 12690205.
  • Hillier LW, Fulton RS, Fulton LA, et al. (2003). "The DNA sequence of human chromosome 7". Nature. 424 (6945): 157–64. Bibcode:2003Natur.424..157H. doi:10.1038/nature01782. PMID 12853948.
  • Kitajiri SI, Furuse M, Morita K, et al. (2004). "Expression patterns of claudins, tight junction adhesion molecules, in the inner ear". Hear. Res. 187 (1–2): 25–34. doi:10.1016/S0378-5955(03)00338-1. PMID 14698084. S2CID 31183039.
  • Acharya P, Beckel J, Ruiz WG, et al. (2004). "Distribution of the tight junction proteins ZO-1, occludin, and claudin-4, -8, and -12 in bladder epithelium". Am. J. Physiol. Renal Physiol. 287 (2): F305–18. doi:10.1152/ajprenal.00341.2003. PMID 15068973.
  • Liu F, Koval M, Ranganathan S, Fanayan S, Hancock WS, Lundberg EK, Beavis RC, Lane L, Duek P, McQuade L, Kelleher NL, Baker MS (2015). "A systems proteomics view of the endogenous human claudin protein family". J Proteome Res. 15 (2): 339–359. doi:10.1021/acs.jproteome.5b00769. PMC 4777318. PMID 26680015.


  • v
  • t
  • e