NUCKS1

Protein-coding gene in the species Homo sapiens
NUCKS1
Identifiers
AliasesNUCKS1, NUCKS, JC7, nuclear casein kinase and cyclin-dependent kinase substrate 1, nuclear casein kinase and cyclin dependent kinase substrate 1
External IDsOMIM: 611912; MGI: 1934811; HomoloGene: 23377; GeneCards: NUCKS1; OMA:NUCKS1 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for NUCKS1
Genomic location for NUCKS1
Band1q32.1Start205,712,822 bp[1]
End205,750,182 bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for NUCKS1
Genomic location for NUCKS1
Band1|1 E4Start131,838,272 bp[2]
End131,864,059 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • tendon of biceps brachii

  • parietal pleura

  • internal globus pallidus

  • germinal epithelium

  • visceral pleura

  • middle temporal gyrus

  • external globus pallidus

  • pars reticulata

  • seminal vesicula

  • tibia
Top expressed in
  • Rostral migratory stream

  • primitive streak

  • ciliary body

  • abdominal wall

  • migratory enteric neural crest cell

  • dermis

  • Gonadal ridge

  • renal corpuscle

  • internal carotid artery

  • vas deferens
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • DNA-binding transcription activator activity, RNA polymerase II-specific
  • transcription factor binding
  • chromatin binding
  • double-stranded DNA binding
  • single-stranded DNA binding
  • RNA binding
Cellular component
  • cytoplasm
  • nucleus
  • chromatin
  • nucleolus
Biological process
  • positive regulation of insulin receptor signaling pathway
  • transcription by RNA polymerase II
  • glucose homeostasis
  • positive regulation of transcription by RNA polymerase II
  • interstrand cross-link repair
  • regulation of DNA strand elongation
  • cellular response to X-ray
  • regulation of DNA replication
  • gene conversion
  • double-strand break repair via homologous recombination
  • regulation of transcription by RNA polymerase II
  • replication fork processing
  • cellular glucose homeostasis
  • chromatin organization
  • regulation of insulin receptor signaling pathway
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

64710

98415

Ensembl

ENSG00000069275

ENSMUSG00000026434

UniProt

Q9H1E3

Q80XU3

RefSeq (mRNA)

NM_022731

NM_001145804
NM_175294

RefSeq (protein)

NP_073568

NP_001139276
NP_780503

Location (UCSC)Chr 1: 205.71 – 205.75 MbChr 1: 131.84 – 131.86 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Nuclear ubiquitous casein and cyclin-dependent kinases substrate is a protein that in humans is encoded by the NUCKS1 gene.[5][6]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000069275 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026434 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Ostvold AC, Norum JH, Mathiesen S, Wanvik B, Sefland I, Grundt K (Apr 2001). "Molecular cloning of a mammalian nuclear phosphoprotein NUCKS, which serves as a substrate for Cdk1 in vivo". Eur J Biochem. 268 (8): 2430–40. doi:10.1046/j.1432-1327.2001.02120.x. PMID 11298763.
  6. ^ "Entrez Gene: NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1".

Further reading

  • Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
  • Thompson HG, Harris JW, Wold BJ, et al. (2003). "Identification and confirmation of a module of coexpressed genes". Genome Res. 12 (10): 1517–22. doi:10.1101/gr.418402. PMC 187523. PMID 12368243.
  • Grundt K, Skjeldal L, Anthonsen HW, et al. (2002). "A putative DNA-binding domain in the NUCKS protein". Arch. Biochem. Biophys. 407 (2): 168–75. doi:10.1016/S0003-9861(02)00513-1. PMID 12413487.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
  • Ballif BA, Villén J, Beausoleil SA, et al. (2005). "Phosphoproteomic analysis of the developing mouse brain". Mol. Cell. Proteomics. 3 (11): 1093–101. doi:10.1074/mcp.M400085-MCP200. PMID 15345747.
  • Grundt K, Haga IV, Aleporou-Marinou V, et al. (2004). "Characterisation of the NUCKS gene on human chromosome 1q32.1 and the presence of a homologous gene in different species". Biochem. Biophys. Res. Commun. 323 (3): 796–801. doi:10.1016/j.bbrc.2004.08.153. PMID 15381070.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
  • Gevaert K, Staes A, Van Damme J, et al. (2006). "Global phosphoproteome analysis on human HepG2 hepatocytes using reversed-phase diagonal LC". Proteomics. 5 (14): 3589–99. doi:10.1002/pmic.200401217. PMID 16097034. S2CID 895879.
  • Beausoleil SA, Villén J, Gerber SA, et al. (2006). "A probability-based approach for high-throughput protein phosphorylation analysis and site localization". Nat. Biotechnol. 24 (10): 1285–92. doi:10.1038/nbt1240. PMID 16964243. S2CID 14294292.
  • Olsen JV, Blagoev B, Gnad F, et al. (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983. S2CID 7827573.
  • Grundt K, Haga IV, Huitfeldt HS, Ostvold AC (2007). "Identification and characterization of two putative nuclear localization signals (NLS) in the DNA-binding protein NUCKS". Biochim. Biophys. Acta. 1773 (9): 1398–406. doi:10.1016/j.bbamcr.2007.05.013. PMID 17604136.


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