RALYL

Protein-coding gene in the species Homo sapiens
RALYL
Identifiers
AliasesRALYL, HNRPCL3, RALY RNA binding protein-like, RALY RNA binding protein like
External IDsOMIM: 614648; MGI: 1924147; HomoloGene: 18366; GeneCards: RALYL; OMA:RALYL - orthologs
Gene location (Human)
Chromosome 8 (human)
Chr.Chromosome 8 (human)[1]
Chromosome 8 (human)
Genomic location for RALYL
Genomic location for RALYL
Band8q21.2Start84,182,787 bp[1]
End84,921,844 bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for RALYL
Genomic location for RALYL
Band3|3 A1Start13,536,715 bp[2]
End14,247,347 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • cerebellar vermis

  • middle temporal gyrus

  • Brodmann area 23

  • cerebellar hemisphere

  • orbitofrontal cortex

  • dorsolateral prefrontal cortex

  • right hemisphere of cerebellum

  • superior frontal gyrus

  • Brodmann area 9
Top expressed in
  • mammillary body

  • lateral septal nucleus

  • dorsomedial hypothalamic nucleus

  • Region I of hippocampus proper

  • dorsal tegmental nucleus

  • ventral tegmental area

  • habenula

  • dentate gyrus of hippocampal formation granule cell

  • visual cortex

  • lateral hypothalamus
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

138046

76897

Ensembl

ENSG00000184672

ENSMUSG00000039717

UniProt

Q86SE5

Q8BTF8

RefSeq (mRNA)
NM_001100391
NM_001100392
NM_001100393
NM_001287243
NM_001287244

NM_173848
NM_001354305
NM_001354306
NM_001354307
NM_001354310
NM_001354311
NM_001354312
NM_001354313
NM_001354314
NM_001354315
NM_001354316
NM_001354318
NM_001354320
NM_001354321
NM_001354322
NM_001354323
NM_001354325
NM_001354308
NM_001354309
NM_001354317
NM_001354319

NM_001163328
NM_001163329
NM_001163330
NM_178631
NM_001357033

NM_001357034
NM_001357035
NM_001357036

RefSeq (protein)
NP_001093861
NP_001093862
NP_001093863
NP_001274172
NP_001274173

NP_776247
NP_001341234
NP_001341235
NP_001341236
NP_001341239
NP_001341240
NP_001341241
NP_001341242
NP_001341243
NP_001341244
NP_001341245
NP_001341247
NP_001341249
NP_001341250
NP_001341251
NP_001341252
NP_001341254
NP_001341237
NP_001341238
NP_001341246
NP_001341248

NP_001156800
NP_001156801
NP_001156802
NP_848746
NP_001343962

NP_001343963
NP_001343964
NP_001343965

Location (UCSC)Chr 8: 84.18 – 84.92 MbChr 3: 13.54 – 14.25 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

RNA-binding Raly-like protein is a protein that in humans is encoded by the RALYL gene.[5][6]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000184672 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000039717 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Ji CN, Chen JZ, Xie Y, Wang S, Qian J, Zhao E, Jin W, Wu XZ, Xu WX, Ying K, Mao YM (Apr 2003). "A novel cDNA encodes a putative hRALY-like protein, hRALYL". Mol Biol Rep. 30 (1): 61–67. doi:10.1023/A:1022295311177. PMID 12688537. S2CID 23399484.
  6. ^ "Entrez Gene: LOC138046 hypothetical protein LOC138046".

Further reading

  • Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
  • Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–1178. Bibcode:2005Natur.437.1173R. doi:10.1038/nature04209. PMID 16189514. S2CID 4427026.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–45. doi:10.1038/ng1285. PMID 14702039.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–16903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Yu W, Andersson B, Worley KC, et al. (1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
  • Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction". Anal. Biochem. 236 (1): 107–113. doi:10.1006/abio.1996.0138. PMID 8619474.


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