SAC3D1

Protein-coding gene in the species Homo sapiens
SAC3D1
Identifiers
AliasesSAC3D1, HSU79266, SHD1, SAC3 domain containing 1
External IDsMGI: 1913656; HomoloGene: 40867; GeneCards: SAC3D1; OMA:SAC3D1 - orthologs
Gene location (Human)
Chromosome 11 (human)
Chr.Chromosome 11 (human)[1]
Chromosome 11 (human)
Genomic location for SAC3D1
Genomic location for SAC3D1
Band11q13.1Start65,040,901 bp[1]
End65,044,828 bp[1]
Gene location (Mouse)
Chromosome 19 (mouse)
Chr.Chromosome 19 (mouse)[2]
Chromosome 19 (mouse)
Genomic location for SAC3D1
Genomic location for SAC3D1
Band19|19 AStart6,166,030 bp[2]
End6,168,680 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right testis

  • left testis

  • tendon of biceps brachii

  • gingival epithelium

  • sperm

  • mucosa of transverse colon

  • internal globus pallidus

  • gonad

  • amniotic fluid

  • palpebral conjunctiva
Top expressed in
  • embryo

  • embryo

  • external carotid artery

  • fetal liver hematopoietic progenitor cell

  • internal carotid artery

  • epiblast

  • neural tube

  • proximal tubule

  • medial ganglionic eminence

  • right kidney
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
  • protein binding
Cellular component
  • cytoplasm
  • microtubule organizing center
  • spindle
  • cytoskeleton
  • nucleus
  • centrosome
Biological process
  • cell cycle
  • cell division
  • spindle assembly
  • centrosome duplication
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

29901

66406

Ensembl

ENSG00000168061

ENSMUSG00000024790

UniProt

A6NKF1

A6H687

RefSeq (mRNA)

NM_013299

NM_133678

RefSeq (protein)

NP_037431
NP_001354414
NP_001354415
NP_001354416
NP_001354417

NP_598439

Location (UCSC)Chr 11: 65.04 – 65.04 MbChr 19: 6.17 – 6.17 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

SAC3 domain-containing protein 1 is a protein that in humans is encoded by the SAC3D1 gene.[5][6][7]


References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000168061 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000024790 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Andersson B, Wentland MA, Ricafrente JY, Liu W, Gibbs RA (Jun 1996). "A "double adaptor" method for improved shotgun library construction". Anal Biochem. 236 (1): 107–13. doi:10.1006/abio.1996.0138. PMID 8619474.
  6. ^ Yu W, Andersson B, Worley KC, Muzny DM, Ding Y, Liu W, Ricafrente JY, Wentland MA, Lennon G, Gibbs RA (Jun 1997). "Large-scale concatenation cDNA sequencing". Genome Res. 7 (4): 353–8. doi:10.1101/gr.7.4.353. PMC 139146. PMID 9110174.
  7. ^ "Entrez Gene: SAC3D1 SAC3 domain containing 1".

Further reading

  • Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
  • Baillat D, Hakimi MA, Näär AM, et al. (2005). "Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II". Cell. 123 (2): 265–76. doi:10.1016/j.cell.2005.08.019. PMID 16239144. S2CID 18069461.
  • Suzuki Y, Yamashita R, Shirota M, et al. (2004). "Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions". Genome Res. 14 (9): 1711–8. doi:10.1101/gr.2435604. PMC 515316. PMID 15342556.
  • Khuda SE, Yoshida M, Xing Y, et al. (2004). "The Sac3 homologue shd1 is involved in mitotic progression in mammalian cells". J. Biol. Chem. 279 (44): 46182–90. doi:10.1074/jbc.M405347200. PMID 15322101.
  • Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004). "Large-scale characterization of HeLa cell nuclear phosphoproteins". Proc. Natl. Acad. Sci. U.S.A. 101 (33): 12130–5. Bibcode:2004PNAS..10112130B. doi:10.1073/pnas.0404720101. PMC 514446. PMID 15302935.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.


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