TXNDC5

Protein-coding gene in the species Homo sapiens
TXNDC5
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2DIZ, 3UJ1, 3UVT, 3WGD, 3WGE, 3WGX

Identifiers
AliasesTXNDC5, ENDOPDI, ERP46, HCC-2, PDIA15, STRF8, UNQ364, HCC2, thioredoxin domain containing 5
External IDsOMIM: 616412; MGI: 2145316; HomoloGene: 11125; GeneCards: TXNDC5; OMA:TXNDC5 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for TXNDC5
Genomic location for TXNDC5
Band6p24.3Start7,881,517 bp[1]
End7,910,788 bp[1]
Gene location (Mouse)
Chromosome 13 (mouse)
Chr.Chromosome 13 (mouse)[2]
Chromosome 13 (mouse)
Genomic location for TXNDC5
Genomic location for TXNDC5
Band13|13 A3.3Start38,684,055 bp[2]
End38,712,800 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • duodenum

  • rectum

  • stromal cell of endometrium

  • appendix

  • lymph node

  • spleen

  • smooth muscle tissue

  • placenta

  • islet of Langerhans

  • body of pancreas
Top expressed in
  • lacrimal gland

  • calvaria

  • salivary gland

  • pyloric antrum

  • molar

  • parotid gland

  • external carotid artery

  • submandibular gland

  • crypt of lieberkuhn of small intestine

  • seminal vesicula
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • isomerase activity
  • protein disulfide isomerase activity
Cellular component
  • lysosomal lumen
  • endoplasmic reticulum lumen
  • extracellular exosome
  • endoplasmic reticulum
  • extracellular region
  • azurophil granule lumen
Biological process
  • apoptotic cell clearance
  • negative regulation of apoptotic process
  • protein folding
  • cell redox homeostasis
  • response to endoplasmic reticulum stress
  • neutrophil degranulation
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

81567

105245

Ensembl

ENSG00000239264

ENSMUSG00000038991

UniProt

Q8NBS9

Q91W90

RefSeq (mRNA)

NM_030810
NM_001145549
NM_022085

NM_001289598
NM_001289599
NM_145367

RefSeq (protein)

NP_001139021
NP_110437

NP_001276527
NP_001276528
NP_663342

Location (UCSC)Chr 6: 7.88 – 7.91 MbChr 13: 38.68 – 38.71 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Thioredoxin domain-containing protein 5 is a protein that in humans is encoded by the TXNDC5 gene.[5]

Function

This gene encodes a protein disulfide-isomerase.[6] Its expression is induced by hypoxia and its role may be to protect hypoxic cells from apoptosis. This gene can be co-transcribed with the upstream gene MUTED.[5]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000239264 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000038991 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ a b "Entrez Gene: TXNDC5 thioredoxin domain containing 5".
  6. ^ Galligan JJ, Petersen DR (July 2012). "The human protein disulfide isomerase gene family". Human Genomics. 6 (6): 6. doi:10.1186/1479-7364-6-6. PMC 3500226. PMID 23245351.

Further reading

  • Neve EP, Svensson K, Fuxe J, Pettersson RF (Aug 2003). "VIPL, a VIP36-like membrane protein with a putative function in the export of glycoproteins from the endoplasmic reticulum". Experimental Cell Research. 288 (1): 70–83. doi:10.1016/S0014-4827(03)00161-7. PMID 12878160.
  • Knoblach B, Keller BO, Groenendyk J, Aldred S, Zheng J, Lemire BD, Li L, Michalak M (Oct 2003). "ERp19 and ERp46, new members of the thioredoxin family of endoplasmic reticulum proteins". Molecular & Cellular Proteomics. 2 (10): 1104–19. doi:10.1074/mcp.M300053-MCP200. PMID 12930873.
  • Sullivan DC, Huminiecki L, Moore JW, Boyle JJ, Poulsom R, Creamer D, Barker J, Bicknell R (Nov 2003). "EndoPDI, a novel protein-disulfide isomerase-like protein that is preferentially expressed in endothelial cells acts as a stress survival factor". The Journal of Biological Chemistry. 278 (47): 47079–88. doi:10.1074/jbc.M308124200. PMID 12963716.
  • Bruneel A, Labas V, Mailloux A, Sharma S, Royer N, Vinh J, Pernet P, Vaubourdolle M, Baudin B (Oct 2005). "Proteomics of human umbilical vein endothelial cells applied to etoposide-induced apoptosis". Proteomics. 5 (15): 3876–84. doi:10.1002/pmic.200401239. PMID 16130169. S2CID 26007149.
  • Nissom PM, Lo SL, Lo JC, Ong PF, Lim JW, Ou K, Liang RC, Seow TK, Chung MC (Apr 2006). "Hcc-2, a novel mammalian ER thioredoxin that is differentially expressed in hepatocellular carcinoma". FEBS Letters. 580 (9): 2216–26. doi:10.1016/j.febslet.2006.03.029. PMID 16574106. S2CID 1344909.
  • Wang Y, Ma Y, Lü B, Xu E, Huang Q, Lai M (Oct 2007). "Differential expression of mimecan and thioredoxin domain-containing protein 5 in colorectal adenoma and cancer: a proteomic study". Experimental Biology and Medicine. 232 (9): 1152–9. doi:10.3181/0701-RM-8. PMID 17895523. S2CID 42784486.
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  • 2diz: The solution structure of the third thioredoxin domain of human Thioredoxin domain-containing protein 5
    2diz: The solution structure of the third thioredoxin domain of human Thioredoxin domain-containing protein 5
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TXNDC human genes


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