WDR47

Protein-coding gene in the species Homo sapiens
WDR47
Identifiers
AliasesWDR47, WD repeat domain 47
External IDsOMIM: 615734; MGI: 2139593; HomoloGene: 8984; GeneCards: WDR47; OMA:WDR47 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for WDR47
Genomic location for WDR47
Band1p13.3Start108,970,214 bp[1]
End109,042,113 bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for WDR47
Genomic location for WDR47
Band3|3 F3Start108,498,595 bp[2]
End108,553,035 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • lateral nuclear group of thalamus

  • ganglionic eminence

  • orbitofrontal cortex

  • Region I of hippocampus proper

  • postcentral gyrus

  • Pars compacta

  • superior frontal gyrus

  • Brodmann area 10

  • pars reticulata

  • ventricular zone
Top expressed in
  • neural layer of retina

  • hippocampus proper

  • facial motor nucleus

  • temporal lobe

  • piriform cortex

  • dentate gyrus of hippocampal formation granule cell

  • amygdala

  • nucleus accumbens

  • prefrontal cortex

  • medial geniculate nucleus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
Cellular component
  • cytoskeleton
  • cytoplasm
  • microtubule
Biological process
  • multicellular organism development
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

22911

99512

Ensembl

ENSG00000085433

ENSMUSG00000040389

UniProt

O94967

Q8CGF6

RefSeq (mRNA)

NM_001142550
NM_001142551
NM_014969

NM_181400
NM_001358053
NM_001358054
NM_001358055

RefSeq (protein)

NP_001136022
NP_001136023
NP_055784

NP_852065
NP_001344982
NP_001344983
NP_001344984

Location (UCSC)Chr 1: 108.97 – 109.04 MbChr 3: 108.5 – 108.55 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

WD repeat domain 47 is a protein that in humans is encoded by the WDR47 gene.[5]

See also

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000085433 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000040389 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: WD repeat domain 47". Retrieved 2011-08-30.

Further reading

  • Nagase T, Ishikawa K, Suyama M, Kikuno R, Hirosawa M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Dec 1998). "Prediction of the coding sequences of unidentified human genes. XII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Research. 5 (6): 355–64. doi:10.1093/dnares/5.6.355. PMID 10048485.
  • Stelzl U, Worm U, Lalowski M, Haenig C, Brembeck FH, Goehler H, Stroedicke M, Zenkner M, Schoenherr A, Koeppen S, Timm J, Mintzlaff S, Abraham C, Bock N, Kietzmann S, Goedde A, Toksöz E, Droege A, Krobitsch S, Korn B, Birchmeier W, Lehrach H, Wanker EE (Sep 2005). "A human protein-protein interaction network: a resource for annotating the proteome". Cell. 122 (6): 957–68. doi:10.1016/j.cell.2005.08.029. hdl:11858/00-001M-0000-0010-8592-0. PMID 16169070. S2CID 8235923.
  • Maruyama K, Sugano S (Jan 1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
  • Oh JH, Yang JO, Hahn Y, Kim MR, Byun SS, Jeon YJ, Kim JM, Song KS, Noh SM, Kim S, Yoo HS, Kim YS, Kim NS (Dec 2005). "Transcriptome analysis of human gastric cancer". Mammalian Genome. 16 (12): 942–54. doi:10.1007/s00335-005-0075-2. PMID 16341674. S2CID 69278.
  • Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, Suyama A, Sugano S (Oct 1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.


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